Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015904296.1_cds_XP_016454447.1_48473
CDS Infomation

[gene=LOC107778673] [db_xref=GeneID:107778673] [protein=uncharacterized protein LOC107778673] [protein_id=XP_016454447.1] [location=complement(join(11057..11245,11550..11737,11813..11871,13038..13147,13308..13765,14068..14365,14652..14762,15266..15358,15587..15638,15784..15881,16685..16749,16868..16933,17154..17261,17354..17408))] [gbkey=CDS]
Sequence

ATGGCACCGAAAAAGCGTTCTTCTCTCTTCTCTTATACTACACCTATTCCCATCGTTTTA
GGAAATTGTAAGGTTGTTGTGGAAGCTGGGAAATTCTCCTCAGAATTAAACGGAAATAAT
CTCGAAATATCTTTGGCAAAGAACGCCAAAGTCAAAATCTCTGTGGTGGATGATGGGAAT
TGTTCAAAGGAAGGCGAAATCCCTATGAATAGTGGGTATGAGGAAAATGGTAATTACTGC
TTCATGCTCATTAATCCCAAAGATGTTGACGGAAAAACCAAGTCTTTACTTCAGGAAGTA
TTGAGCATTTATTCAAATGAGCTACCAGCAATGAACTATGCTGCAAACACAGGAAAAGAA
TCACAATTCCTTGAAAGATGTGTATCAAATGGGAAGTACTGCACGCTAGTTCTGAAAACC
AAGGAGGACATAGAACCTGGGGAAGTCATTGCTGCAATCACTTATCAAATAGTTCCAGCT
GATATGCAATTTGCTGAGGTTCCTCTTGCGGCTGTTAAATCGGTGTACCAACTCAAGGGG
ATTGGTCGCTTAATCTATTTGGAGCTGAGGAAAAGATTGCAAGGTGTGGGCGTTCGAACC
GTACTTTGCTGGGGAGATAAGGAGTCTGAAGGATTTTGGCTTAAGCAGGGGTTTTCAGTT
ATTGGTCAAGTTGACACGAAAGGCAGAGCTCGCAGGCTCCCCGTTAAGGCTGATATTCGA
AAAGCATTGTGTTTTCCTGGCGGTTCAAATCTCATGATTTCTCATTTCAACAAGGACAGC
TTACACGATTCTGCAGTGTATCTAAATTTGAAATTCCCCTTAAAGCCTTCAGGAGAGGAT
TGCCAATCTCCAGTTCTTCAAGAACAAAGAGAAACTGTGTCTGAGGGAAATGACCATTCC
CAGGACAGAAATGAGGCAATTAAAAGCATCGGCTCTAACTACTATGATTGTCAAGACTTT
CAACCTGGAGATGGTGCTGTTGGGAGCAGCAAGCATGGACCTATGGGATTCAATGAAAGC
GAACGCCAAGCTTTACTGAAGCAATGTTCTTGTTCAGCATCAGGATCAAAGAAGAGGACT
TGGGAAACCTCATACACTTCTGTTAAATCCAAAAAAATAAAGGGAGGACATCAAACTGAC
TGTGACTTGCATGCTAAGGACAATAGTTTAGAAAGTGATGTAGGGATTAGTTTCTCTGCA
GTTTCAAAGAGAAAATGTAAGACAGATATTAATCCTAGTGACCGATTAACAAGCCGCTCT
CTGGAAAAGAATGCTGAAGAAGCTACCGCAGTTAATTTGACATATAAAGGTCACAGTAGC
CCAGGCATTTATTCAAGAGGGACAAACTACAGAATTATGCTGATGAATATTGCTGATGAT
AATAAAAAAGCAAATTTGACCAAGATAATCGGAGACCTTGGTGGAGATGTTACTTCTGAT
GGAAGTGTAAGCACACACGTAGTCACAGGCAAAGTGAGGAAAACCTTGAATTTTTGCTCT
GCTCTATGCTCAGGAGCTTGGATACTGTCACCAAGTTGGTTGAAAGAAAGCTTCCGGAAT
GGCCAATTTATAGATGAAATGCCATTTATTTTGAGAGATGAAGACTACGAACTGCAGTAC
AGAACTGAGCTTAAAGGGGTAGTTCTTAGAGCAAAAACATACCCCCAATCTCTGCTCAAG
GGGTATGACATATGTCTTGCAGCTCATGTTCATCCTCCAGTTGGTACCTTATCAGACATT
GTAAATTCTGCAGGAGGAAATGTTATACATGGACTAGATCAAGTGAAAGACGATTCTAAA
ACGATATTCGTTGCATGTGAAGAAGACATGGATGAAGCACTGTCAGCAGTTAAGAAGGGA
ATATGGACTTTCAGCAGTGACTGGTTTATGAACTGCATAATGAAACAAGAGCTTGACTTA
GGAGCTCCTCAATTTGCAGAGTCCCTCTAA

Peptide Sequence

PEP ID

XP_016454447.1
PEP Infomation

PREDICTED: uncharacterized protein LOC107778673 [Nicotiana tabacum]
Sequence

MAPKKRSSLFSYTTPIPIVLGNCKVVVEAGKFSSELNGNNLEISLAKNAKVKISVVDDGN
CSKEGEIPMNSGYEENGNYCFMLINPKDVDGKTKSLLQEVLSIYSNELPAMNYAANTGKE
SQFLERCVSNGKYCTLVLKTKEDIEPGEVIAAITYQIVPADMQFAEVPLAAVKSVYQLKG
IGRLIYLELRKRLQGVGVRTVLCWGDKESEGFWLKQGFSVIGQVDTKGRARRLPVKADIR
KALCFPGGSNLMISHFNKDSLHDSAVYLNLKFPLKPSGEDCQSPVLQEQRETVSEGNDHS
QDRNEAIKSIGSNYYDCQDFQPGDGAVGSSKHGPMGFNESERQALLKQCSCSASGSKKRT
WETSYTSVKSKKIKGGHQTDCDLHAKDNSLESDVGISFSAVSKRKCKTDINPSDRLTSRS
LEKNAEEATAVNLTYKGHSSPGIYSRGTNYRIMLMNIADDNKKANLTKIIGDLGGDVTSD
GSVSTHVVTGKVRKTLNFCSALCSGAWILSPSWLKESFRNGQFIDEMPFILRDEDYELQY
RTELKGVVLRAKTYPQSLLKGYDICLAAHVHPPVGTLSDIVNSAGGNVIHGLDQVKDDSK
TIFVACEEDMDEALSAVKKGIWTFSSDWFMNCIMKQELDLGAPQFAESL

Transcript Sequence

Gene sequence data has not been registered.